All functions

dir_spec()

Specify Input/Output Directories For Project

find_UTM_zone()

Functions for converting longitude and latitude to UTM zones and coordinates.

get.list.dims()

Get Dimensions of List Elements

get_ebird_obs_files()

Identify and Unpack eBird Observations Files

longlat_to_UTM()

Convert long, lat Locations to UTM coordinates and zones Returns a data frame containing the UTM values, the zone and the hemisphere associated with long lat coordinates.

make_array()

Cast Data to Array or Matrix for Use in JAGS

make_bbs_spatial()

Manipulate the BBS route shapefiles

make_bundle()

Bundle Data for Use in JAGS

make_ebird()

Munge eBird for Use Case

make_ebird_spatial()

Create an SF object for eBird Observations

make_gam()

Function for Generating Basis Functions

make_inits_list()

Create a List of Repeated Initial Values for each Chain

make_mat()

Make 2-D array (Matrix for JAGS)

make_model_data()

Make List of Data and Constants for Nimble/JAGS

make_raster()

Create a Spatial Sampling Grid as Raster using WorldClim

make_spatial_grid()

Create a Spatial Sampling Grid

munge_date_time() munge_date_time()

Munge Dates and Times of the eBird and BBS Datasets

munge_ebird()

Munge eBird Data

munge_ebird_data()

Create and Write or Load In the Filtered eBird Data

partition_ebird_events()

Partition the eBird Sampling Events Data File by States/Provinces

pluck_multiple()

Pluck Multiple Elements from List Object

run_nimble_model()

Run Nimble Model in Parallel Function will run a Nimble model for 'nc' indepdendent chains

save.runtime()

Write Model Runtimes to Working Directory

set_mcmc_specs()

Set Specifications for MCMC

set_proj_shorthand()

Auto generate a subdirectory name based on project parameters

standardize()

Center and/or Z-Score Transform a Vector or Array

zerofill_ebird()

Create a Zero-filled Data Object for eBird Observations